STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGP-2Phosphoglycolate phosphatase. (208 aa)    
Predicted Functional Partners:
PNPO
Pyridoxamine 5'-phosphate oxidase.
   
  
 0.727
MTPAP
Mitochondrial poly(A) polymerase.
      
 0.653
ACO2
Aconitase 2.
      
 0.582
LOC102366786
Alkaline phosphatase.
    
 
 0.565
LOC102354239
Alkaline phosphatase.
    
 
 0.565
HDHD2
Haloacid dehalogenase like hydrolase domain containing 2.
  
   
 0.547
LHPP
Phospholysine phosphohistidine inorganic pyrophosphate phosphatase.
  
   
 0.507
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.484
ALPL
Alkaline phosphatase.
    
 
 0.464
TUFM
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.460
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.