STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL29Kelch like family member 29. (559 aa)    
Predicted Functional Partners:
HDHD3
Haloacid dehalogenase like hydrolase domain containing 3.
   
 
 0.597
TSPEAR
Thrombospondin type laminin G domain and EAR repeats.
      
 0.553
PXDC1
PX domain containing 1.
      
 0.551
AMZ2
Archaelysin family metallopeptidase 2.
      
 0.546
LOC102364870
Uncharacterized protein.
      
 0.540
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
      
 0.514
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.465
TTC8
Tetratricopeptide repeat domain 8.
    
 0.458
KLHL30
Kelch like family member 30.
    
 
0.451
DNAJB5
DnaJ heat shock protein family (Hsp40) member B5.
      
 0.445
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.