STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPINSNAP associated protein. (137 aa)    
Predicted Functional Partners:
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
   
 
  0.966
GAK
J domain-containing protein.
   
 
  0.966
BLOC1S1
Biogenesis of lysosomal organelles complex-1, subunit 1.
   
 0.960
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
   
 
 0.940
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
    
 0.855
BLOC1S3
Biogenesis of lysosomal organelles complex-1, subunit 3.
    
 0.814
BLOC1S5
Biogenesis of lysosome-related organelles complex 1 subunit 5; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO).
   
 0.770
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 
 0.766
BORCS5
BLOC-1 related complex subunit 5.
   
 
 0.762
BORCS6
Uncharacterized protein.
   
 
 0.743
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.