STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKBP14Peptidylprolyl isomerase. (211 aa)    
Predicted Functional Partners:
PLEKHA8
Pleckstrin homology domain containing A8.
      
 0.774
EFCAB1
EF-hand calcium binding domain 1.
   
 
 0.743
KCNH8
Uncharacterized protein.
   
  
 0.731
RSPRY1
Ring finger and SPRY domain containing 1.
      
 0.700
FBLIM1
Filamin binding LIM protein 1.
      
 0.691
RAB3IL1
RAB3A interacting protein like 1.
      
 0.686
GPATCH3
G-patch domain containing 3.
    
 
 0.685
EAF1
ELL associated factor 1.
      
 0.662
ARL2BP
ADP ribosylation factor like GTPase 2 binding protein.
   
  
 0.646
PLEKHA2
Pleckstrin homology domain containing A2.
   
 0.645
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.