STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D14TBC1 domain family member 14. (682 aa)    
Predicted Functional Partners:
ULK1
Unc-51 like autophagy activating kinase 1.
    
  0.643
ULK2
Unc-51 like autophagy activating kinase 2.
    
  0.584
TRAPPC8-2
Trafficking protein particle complex 8.
    
 
 0.535
LOC102357106
RAB11a, member RAS oncogene family, like.
    
 0.502
RAB11A
RAB11A, member RAS oncogene family.
    
 0.502
LOC102363089
RAB11B, member RAS oncogene family, b.
    
 0.502
RAB11B
RAB11B, member RAS oncogene family.
    
 0.502
RABL2A
RAB, member of RAS oncogene family-like 2.
    
 0.498
RAB25
RAB25, member RAS oncogene family.
    
 0.498
TRAPPC12
Trafficking protein particle complex 12.
    
 
 0.485
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.