STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARNT2Uncharacterized protein. (206 aa)    
Predicted Functional Partners:
NPAS4
Neuronal PAS domain protein 4.
    
 0.948
ARNT2-2
Aryl-hydrocarbon receptor nuclear translocator 2.
 
      0.900
LOC102359453
Uncharacterized protein.
    
 0.832
SIM1
SIM bHLH transcription factor 1.
    
 
0.825
EPAS1
Endothelial PAS domain protein 1.
   
0.820
AHR
Aryl hydrocarbon receptor 1a.
   
0.815
LOC102354477
Uncharacterized protein.
   
0.805
H3B2A5_LATCH
PAS domain-containing protein.
   
 0.802
HIF1A
Hypoxia inducible factor 1 subunit alpha.
   
0.802
H2ZZF1_LATCH
PAS domain-containing protein.
   
 0.761
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.