STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3AKT4_LATCHUncharacterized protein. (128 aa)    
Predicted Functional Partners:
ZMYND10
Zinc finger MYND-type containing 10.
    
 0.738
DNAAF3
Uncharacterized protein.
      
 0.626
CCDC103
Coiled-coil domain containing 103.
      
 0.611
SPAG1
Sperm associated antigen 1.
    
 
 0.609
CCDC39
Coiled-coil domain containing 39.
   
 0.603
CCDC65
Coiled-coil domain containing 65.
   
  
 0.603
DNAI2
Dynein axonemal intermediate chain 2.
    
 
 0.603
LOC102354290
Uncharacterized protein.
    
 0.602
DNAAF5
Dynein axonemal assembly factor 5.
      
 0.592
RSPH4A
Radial spoke head component 4A.
   
 
 0.586
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.