STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HBP1HMG-box transcription factor 1. (539 aa)    
Predicted Functional Partners:
SIN3B
SIN3 transcription regulator family member B.
   
 
 0.683
SIN3A
SIN3 transcription regulator family member A.
   
 
 0.683
MTIF2
Mitochondrial translational initiation factor 2.
      
 0.626
ATXN1
Ataxin 1.
    
 
 0.550
RNF11
Ring finger protein 11a.
      
 0.543
ATXN1L
Ataxin 1 like.
    
 
 0.525
NAA50
N(alpha)-acetyltransferase 50, NatE catalytic subunit.
      
 0.503
RMND5A
Required for meiotic nuclear division 5 homolog A.
   
 
 0.477
GID8
GID complex subunit 8 homolog.
    
 
 0.434
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.