STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM89BFamily with sequence similarity 89 member B. (179 aa)    
Predicted Functional Partners:
CDC16
Cell division cycle 16.
    
 0.974
ANAPC1
Anaphase promoting complex subunit 1.
    
 0.974
ANAPC2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
    
 0.974
CDC27
Cell division cycle 27.
    
 0.974
ANAPC5
Anaphase promoting complex subunit 5.
    
 0.974
UBE2C
Ubiquitin conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.952
HSPB11
Zgc:158640.
    
 0.940
ANAPC10
Anaphase promoting complex subunit 10.
    
 0.940
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
    
 0.938
CDC23
Cell division cycle 23.
    
 0.933
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.