STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KINKin17 DNA and RNA binding protein. (395 aa)    
Predicted Functional Partners:
METTL22
Methyltransferase like 22.
    
 0.969
SF3A3
Splicing factor 3a subunit 3.
    
 
 0.857
SF3A2
Splicing factor 3a subunit 2.
    
 
 0.857
RBMX2
RRM domain-containing protein.
   
   0.837
PIN4
Peptidyl-prolyl cis-trans isomerase.
 
      0.831
SF3B3
Splicing factor 3b subunit 3.
    
   0.813
SF3B1
Splicing factor 3b subunit 1.
    
   0.813
PRPF38A
Pre-mRNA processing factor 38A.
   
   0.737
BUD13
BUD13 homolog.
   
   0.737
EEF2KMT
Eukaryotic elongation factor 2 lysine methyltransferase.
    
 0.722
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.