STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102364128Notochord granular surface; Belongs to the intermediate filament family. (511 aa)    
Predicted Functional Partners:
STT3A
STT3 oligosaccharyltransferase complex catalytic subunit A.
      
 0.741
ST3GAL5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
   
  
 0.673
STT3B
STT3 oligosaccharyltransferase complex catalytic subunit B.
      
 0.670
SLC35A1
Solute carrier family 35 member A1.
      
 0.501
ST8SIA3
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3; Belongs to the glycosyltransferase 29 family.
   
  
 0.490
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
   
  
 0.476
H2ZT25_LATCH
Uncharacterized protein.
   
 0.475
H2ZTG5_LATCH
Uncharacterized protein.
   
 0.475
LOC102360619
Uncharacterized protein.
   
 0.475
ERMN
Uncharacterized protein.
   
  
 0.463
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.