STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF598Zinc finger protein 598. (872 aa)    
Predicted Functional Partners:
RPS3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.816
GIGYF1
GRB10 interacting GYF protein 1.
    
 
 0.767
RPS20
Ribosomal_S10 domain-containing protein.
    
 
 0.742
RPS10
Ribosomal protein S10.
    
 
 0.732
LTN1
Listerin E3 ubiquitin protein ligase 1.
    
 
 0.713
ERMN
Uncharacterized protein.
      
 0.702
NEMF
Nuclear export mediator factor.
      
 0.699
TCF25
Transcription factor 25.
      
 0.685
OTUD3
OTU deubiquitinase 3.
      
 0.685
RACK1
Receptor for activated C kinase 1.
    
 
 0.683
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.