STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHBDL1Rhomboid-related protein 1; May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family. (308 aa)    
Predicted Functional Partners:
EGFL6
EGF like domain multiple 6.
    
 
 0.745
WDR24
WD repeat domain 24.
      
 0.738
RHOT2
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
 
  
 
 0.732
ANKS3
Ankyrin repeat and sterile alpha motif domain containing 3.
      
 0.715
WDR90
WD repeat domain 90.
      
 0.715
ARHGAP6
Rho GTPase activating protein 6.
      
 0.701
COG3
Component of oligomeric golgi complex 3.
      
 0.692
PCDH8
Uncharacterized protein.
   
  
 0.587
GCGR
Glucagon receptor; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.581
STOML1
Stomatin like 1.
  
 0.430
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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