STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF4Serine and arginine rich splicing factor 6b. (491 aa)    
Predicted Functional Partners:
NXF1
Zgc:153681.
   
 0.968
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.853
SRSF2
Serine and arginine rich splicing factor 2a.
   
0.840
RBM25
RNA binding motif protein 25.
   
 
 0.814
SRSF3
Serine and arginine rich splicing factor 3.
   
0.809
ALYREF
Aly/REF export factor.
   
 0.806
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.796
CDC5L
Cell division cycle 5 like.
   
 
 0.794
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.782
U2AF1
U2 small nuclear RNA auxiliary factor 1.
   
 0.775
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.