STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102363520CCHC-type domain-containing protein. (238 aa)    
Predicted Functional Partners:
LOC102361456
Zgc:77262.
 
      0.899
EIF2A
Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner.
   
    0.565
RUNX2
Runt-related transcription factor.
    
  0.480
RUNX3
RUNX family transcription factor 3.
    
  0.480
RUNX1-2
RUNX family transcription factor 1.
    
  0.480
RUNX1
Runt domain-containing protein.
    
  0.480
TAF6L
TATA-box binding protein associated factor 6 like.
   
  
 0.464
MAATS1
MYCBP-associated, testis expressed 1.
    
 
 0.435
OVCA2
OVCA2 serine hydrolase domain containing.
      
 0.424
SNRPB2
Small nuclear ribonucleoprotein polypeptide B2.
   
  
 0.419
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.