STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPTX2Neuronal pentraxin 2. (444 aa)    
Predicted Functional Partners:
RNF2
Ring finger protein 2.
    
 0.745
RING1
Ring finger protein 1.
    
 0.745
EED
Embryonic ectoderm development.
    
 0.603
PCGF3
Uncharacterized protein.
    
 0.550
PCGF2
Polycomb group ring finger 2.
    
 0.550
BMI1
Bmi1 polycomb ring finger oncogene 1b.
    
 0.550
PCGF5
Polycomb group ring finger 5.
    
 0.550
H3ATG0_LATCH
Uncharacterized protein.
    
 0.550
PCGF6
Polycomb group ring finger 6.
    
 0.550
CBFB
Core-binding factor subunit beta.
     
 0.542
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.