STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3ANR5_LATCHSi:ch73-54n14.2. (144 aa)    
Predicted Functional Partners:
LOC102361286
Calmodulin 2; Belongs to the calmodulin family.
    
 0.501
LOC102360791
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.501
CALM2
Calmodulin 2.
    
 0.501
CALM1
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.501
SRBD1
S1 RNA binding domain 1.
      
 0.479
METTL22
Methyltransferase like 22.
      
 0.472
KIN
Kin17 DNA and RNA binding protein.
      
 0.440
GULP1
GULP PTB domain containing engulfment adaptor 1.
      
 0.424
ETFBKMT
Electron transfer flavoprotein subunit beta lysine methyltransferase.
      
 0.422
METTL18
Methyltransferase like 18.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.