STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3ANU0_LATCHUncharacterized protein. (329 aa)    
Predicted Functional Partners:
GAK
J domain-containing protein.
   
 0.974
IGF2R
Uncharacterized protein.
 
    
0.920
IGF2
Insulin like growth factor 2.
    
 
 0.902
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
    
 
 0.885
M6PR
Mannose-6-phosphate receptor, cation dependent.
     
 0.790
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
   
 0.761
SORL1
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.737
LOC102353503
Uncharacterized protein.
    
 0.737
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.686
GGA2
Uncharacterized protein.
    
 
 0.686
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.