STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL28Mitochondrial ribosomal protein L28. (265 aa)    
Predicted Functional Partners:
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.951
MRPS26
Mitochondrial ribosomal protein S26.
   
 
 0.943
MRPL16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.941
MRPS18A
Mitochondrial ribosomal protein S18A.
   
   0.940
GADD45GIP1
GADD45G interacting protein 1.
   
   0.939
MRPL41
Mitochondrial ribosomal protein L41.
   
   0.936
MRPL47
Mitochondrial ribosomal protein L47.
    
 
 0.932
LOC102356981
Uncharacterized protein.
   
 
 0.929
MRPL40
Mitochondrial ribosomal protein L40.
   
   0.926
MRPL9
Mitochondrial ribosomal protein L9.
   
   0.924
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.