STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM189A2Family with sequence similarity 189 member A2. (568 aa)    
Predicted Functional Partners:
RAB3IL1
RAB3A interacting protein like 1.
    
 0.675
TJP2
Tight junction protein 2a (zona occludens 2).
    
 
 0.595
MANSC1
MANSC domain containing 1.
     
 0.557
TMEM171
Transmembrane protein 171.
      
 0.551
EXOC4
Exocyst complex component 4.
    
 0.535
H3A535_LATCH
CHM Rab escort protein.
    
 0.520
EXOC2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.520
RETREG3
Reticulophagy regulator family member 3.
      
 0.506
EXOC7
Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.505
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.499
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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