STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOP9NOP9 nucleolar protein. (663 aa)    
Predicted Functional Partners:
UTP3
UTP3 small subunit processome component.
   
   0.956
RBM19
RNA binding motif protein 19.
   
 
 0.939
DDX56
DEAD-box helicase 56.
   
 
 0.938
AATF
Apoptosis antagonizing transcription factor.
   
 
 0.936
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
    0.923
PUM3
Pumilio RNA binding family member 3.
   
  
 0.916
NOP58
NOP58 ribonucleoprotein.
   
   0.914
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.907
UTP14A
Uncharacterized protein.
   
 
 0.893
NOL6
Nucleolar protein 6.
   
 
 0.891
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.