STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUFIP1C2H2-type domain-containing protein. (315 aa)    
Predicted Functional Partners:
ZNHIT3
Zinc finger HIT-type containing 3.
    
 
 0.700
ZNHIT6
Zinc finger HIT-type containing 6.
   
 
 0.594
PIH1D1
Uncharacterized protein.
    
 
 0.574
EIF5
Eukaryotic translation initiation factor 5.
   
  
 0.558
RPAP3
RNA polymerase II associated protein 3.
   
 0.513
NXF1
Zgc:153681.
    
 
 0.504
PRPF31
Pre-mRNA processing factor 31.
    
 
 0.435
NOP56
NOP56 ribonucleoprotein.
    
 
 0.427
SPEN
Spen family transcriptional repressor.
      
 0.422
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.422
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.