STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3AQG5_LATCHMicrotubule-associated protein. (951 aa)    
Predicted Functional Partners:
CDK5
Cyclin dependent kinase 5.
    
 
 0.667
GAK
J domain-containing protein.
   
 
 0.583
GSK3A
Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.
    
 
 0.534
GSK3B
Glycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily.
    
 
 0.534
BBS9
Bardet-Biedl syndrome 9.
      
 0.475
STMN3
Stathmin; Belongs to the stathmin family.
    
 
 0.466
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 
 0.426
CEP164
Centrosomal protein 164.
      
 0.418
GAP43
Growth associated protein 43.
   
 
 0.414
LOC102365332
Apolipoprotein Ea.
    
 
 0.400
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.