STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPALPP1Uncharacterized protein. (357 aa)    
Predicted Functional Partners:
PTDSS1
Phosphatidylserine synthase 1.
      
 0.602
WDR6
WD repeat domain 6.
      
 0.555
TBL2
Transducin beta like 2.
      
 0.489
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
      
 0.441
PTPN1
Tyrosine-protein phosphatase non-receptor type.
      
 0.428
TMCO1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
      
 0.426
LRRC2
Leucine rich repeat containing 2.
   
  
 0.425
LRRC39
Leucine rich repeat containing 39.
   
  
 0.425
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.