STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102346545Myosin, light chain 12, genome duplicate 2. (172 aa)    
Predicted Functional Partners:
MYH9
Myosin heavy chain 9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.974
ACTB
Uncharacterized protein.
   
 0.943
ROCK2
Rho associated coiled-coil containing protein kinase 2; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
 0.938
LOC102352251
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.934
MYL2
Myosin light chain 2.
  
 
 
0.933
MYL9
Myosin light chain 9.
  
  
 
0.900
MYL1
Myosin light chain 1.
   
0.885
LOC102361066
EF-hand domain-containing protein.
   
 0.885
LOC102359594
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.773
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.773
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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