STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIM2Lens intrinsic membrane protein 2. (207 aa)    
Predicted Functional Partners:
PRPH2
Peripherin 2.
  
 
 
 0.686
RAX2
Retinal homeobox gene 1.
      
 0.535
CRX
Homeobox domain-containing protein.
      
 0.509
GNAT2
G protein subunit alpha transducin 2.
      
 0.502
LOC102348739
Homeobox protein.
      
 0.501
GRIFIN
Galectin.
   
 0.479
CRYBB1
Crystallin beta B1; Belongs to the beta/gamma-crystallin family.
   
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.