STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3ARD1_LATCHDUF3504 domain-containing protein. (294 aa)    
Predicted Functional Partners:
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
   
 0.923
KCTD15
Potassium channel tetramerization domain containing 15.
 
    
 0.906
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
   
 0.877
ARL14EP
ADP ribosylation factor like GTPase 14 effector protein.
    
 
 0.754
ARL14EPL
ADP ribosylation factor like GTPase 14 effector protein like.
    
 
 0.695
SUMO3
Small ubiquitin-related modifier.
    
 0.510
LOC102363126
Small ubiquitin-related modifier.
    
 0.510
SP1
Sp1 transcription factor.
   
  0.462
ZMYM4
Uncharacterized protein.
   
 0.422
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.