STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPCSPhosphopantothenoylcysteine synthetase. (331 aa)    
Predicted Functional Partners:
PPCDC
Phosphopantothenoylcysteine decarboxylase.
    
 0.996
COASY
Coenzyme A synthase.
  
 0.981
PANK4
Pantothenate kinase 4; Belongs to the type II pantothenate kinase family.
     
 0.969
PANK2
Pantothenate kinase 2.
     
 0.960
PANK1
Pantothenate kinase 1.
     
 0.960
PANK3
Pantothenate kinase 3.
     
 0.960
HLCS
Holocarboxylase synthetase.
  
 
 0.935
KYAT3
Kynurenine aminotransferase 3.
  
  0.827
KYAT1
Kynurenine aminotransferase 1.
  
  0.827
CTH
Uncharacterized protein.
   
 
 0.804
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.