STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC15A1Solute carrier family 15 member 1. (707 aa)    
Predicted Functional Partners:
SLC1A1
Amino acid transporter.
   
 
 0.675
SLC1A2
Amino acid transporter.
   
 
 0.673
SLC1A6
Amino acid transporter.
   
 
 0.673
SLC1A3
Amino acid transporter.
   
 
 0.657
MEP1B
Meprin A subunit beta.
   
  
 0.573
SLC2A2
Solute carrier family 2 member 2; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
 
 0.564
SLC22A15
Solute carrier family 22 member 15.
      
 0.563
LOC102347438
Solute carrier family 22 member 15.
      
 0.563
BLK
Tyrosine-protein kinase.
   
  
 0.555
H2ZSF9_LATCH
Uncharacterized protein.
      
 0.554
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.