STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDRD6Tudor domain containing 6. (1667 aa)    
Predicted Functional Partners:
PIWIL2
Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.856
PIWIL1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 0.844
PIWIL4
Piwi like RNA-mediated gene silencing 4.
   
 0.759
TDRD9
Tudor domain containing 9.
   
0.677
ANKRD66
Ankyrin repeat domain 66.
 
  
 0.609
TRAPPC8
Uncharacterized protein.
      
 0.567
TRAPPC8-2
Trafficking protein particle complex 8.
      
 0.567
PLA2G7
Platelet-activating factor acetylhydrolase.
      
 0.562
CAPZA3
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
  
 0.537
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
 0.515
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.