STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANXA7Annexin. (495 aa)    
Predicted Functional Partners:
LOC102356272
Lysine--tRNA ligase.
      
 0.501
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
      
 0.491
LOC102351466
Uncharacterized protein.
   
 0.435
AIF1
Allograft inflammatory factor 1.
   
 
 0.429
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase.
      
 0.424
TRIO
Trio Rho guanine nucleotide exchange factor.
    
  0.407
H3B3H9_LATCH
Uncharacterized protein.
    
  0.407
ARHGEF25
Uncharacterized protein.
    
  0.407
LTA4H
Leukotriene A4 hydrolase.
      
 0.406
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.