STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC45Leucine rich repeat containing 45. (679 aa)    
Predicted Functional Partners:
H3B193_LATCH
Uncharacterized protein.
      
 0.687
WDR37
WD repeat domain 37.
      
 0.623
ANKS3
Ankyrin repeat and sterile alpha motif domain containing 3.
   
    0.610
ARMC8
Armadillo repeat containing 8.
      
 0.602
SCLT1
Sodium channel and clathrin linker 1.
    
 
 0.582
CEP89
Centrosomal protein 89.
     
 0.563
PHACTR1
Phosphatase and actin regulator.
      
 0.555
CCDC120
Si:ch211-169p10.1.
      
 0.507
CCDC68
Coiled-coil domain containing 68.
      
 0.499
FBF1
Fas binding factor 1.
   
 
 0.497
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.