STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBED1Zinc finger BED-type containing 1. (695 aa)    
Predicted Functional Partners:
DHRSX
Dehydrogenase/reductase X-linked.
 
  
 
 0.599
ASMTL
Acetylserotonin O-methyltransferase like.
   
  
 0.594
ITGBL1
Integrin subunit beta like 1.
    
 
 0.550
HTR1F
5-hydroxytryptamine (serotonin) receptor 1Fb.
      
 0.540
SH3RF3
SH3 domain containing ring finger 3.
      
 0.540
UPF3A
UPF3A regulator of nonsense mediated mRNA decay.
      
 0.540
LETM1
Leucine zipper and EF-hand containing transmembrane protein 1.
      
 0.540
AKAP17A
A-kinase anchoring protein 17A.
      
 0.540
JADE1
Jade family PHD finger 1.
      
 0.536
CDCA4
Cell division cycle associated 4.
      
 0.535
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.