STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRGUKLeucine rich repeats and guanylate kinase domain containing. (595 aa)    
Predicted Functional Partners:
MYCBP
MYC binding protein.
    
 
 0.908
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
   
 
 0.897
AK9
Adenylate kinase 9.
   
 0.879
SPAG17
Sperm associated antigen 17.
   
 
 0.864
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
0.858
CCDC189
Uncharacterized protein.
    
 
 0.849
H3AJ81_LATCH
Serine/threonine-protein phosphatase.
   
 0.847
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.847
LOC102359594
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.847
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.847
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.