STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELOCElongin C; Belongs to the SKP1 family. (113 aa)    
Predicted Functional Partners:
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.999
RBX1
Ring-box 1.
   
 0.999
CUL2
Cullin 2; Belongs to the cullin family.
   
 0.999
LOC102364581
Von Hippel-Lindau tumor suppressor.
   
 0.998
UBXN7
UBX domain-containing protein 7.
   
 0.997
NEDD8
NEDD8 ubiquitin like modifier.
   
 0.988
SOCS2
Suppressor of cytokine signaling 2.
    
 0.982
SOCS4
Suppressor of cytokine signaling 4.
    
 0.975
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.974
ASB9
Ankyrin repeat and SOCS box containing 9.
    
 0.971
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.