STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102360396Si:dkey-26g8.5; Belongs to the peptidase C1 family. (336 aa)    
Predicted Functional Partners:
LOC102358477
Uncharacterized protein; Belongs to the peptidase C1 family.
  
 
 
0.905
LOC102351388
Cathepsin L.1; Belongs to the peptidase C1 family.
  
  
 
0.903
CD74
CD74 molecule.
   
 0.799
LOC102355307
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.788
CTSD
Cathepsin D; Belongs to the peptidase A1 family.
   
 0.778
TLR9
Toll-like receptor 9.
     
 0.722
MMP13
Matrix metallopeptidase 13.
   
 
 0.666
LGMN
Legumain.
   
 
 0.665
BIRC2
Baculoviral IAP repeat containing 2.
     
 0.655
LOC102346472
Uncharacterized protein.
     
 0.653
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.