STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOXL1Lysyl oxidase like 1. (569 aa)    
Predicted Functional Partners:
RNF17
Uncharacterized protein.
      
 0.685
LOC102347610
Uncharacterized protein.
 
    
 0.670
CLIC5
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
      
 0.650
LOC102349388
Uncharacterized protein.
   
 
 0.638
FBLN5
Fibulin 5.
   
 
 0.625
CASP6
Caspase 6; Belongs to the peptidase C14A family.
    
 0.609
TLCD5
TLC domain containing 5.
      
 0.607
FBN1
Fibrillin 1.
   
  
 0.593
STXBP6
V-SNARE coiled-coil homology domain-containing protein.
      
 0.575
LOC102347127
ADF-H domain-containing protein.
    
 
 0.517
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.