STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG9AAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (854 aa)    
Predicted Functional Partners:
SH3GLB1
SH3 domain containing GRB2 like, endophilin B1.
     
 0.911
ATG9B
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
  
  
 
0.901
ULK2
Unc-51 like autophagy activating kinase 2.
   
 
 0.876
ULK1
Unc-51 like autophagy activating kinase 1.
   
 
 0.876
BECN1
Beclin 1, autophagy related.
    
 0.855
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.831
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
     
 0.825
ATG14
Autophagy related 14.
     
 0.815
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 
 0.801
WIPI2
WD repeat domain, phosphoinositide interacting 2.
   
 
 0.763
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.