STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD46Ankyrin repeat domain 46. (228 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
    
 0.967
CUL2
Cullin 2; Belongs to the cullin family.
    
 0.828
CARS2
Cysteinyl-tRNA synthetase 2, mitochondrial.
    
 
 0.775
ACAP1
ArfGAP with coiled-coil, ankyrin repeat and PH domains 1.
    
 
 0.757
HTR2C
5-hydroxytryptamine receptor 2C; Belongs to the G-protein coupled receptor 1 family.
    
 0.730
ELOC
Elongin C; Belongs to the SKP1 family.
    
 0.703
LOC102364514
WD_REPEATS_REGION domain-containing protein.
     
 0.658
ACADVL
Acyl-CoA dehydrogenase very long chain.
   
 
 0.613
GUCY2F
Guanylate cyclase.
    
 
 0.591
NEDD8
NEDD8 ubiquitin like modifier.
    
  0.573
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.