STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITPRID2ITPR interacting domain containing 2. (1255 aa)    
Predicted Functional Partners:
RAB14
RAB14, member RAS oncogene family.
      
 0.634
LOC102352108
Uncharacterized protein.
      
 0.571
ZAN
Zonadhesin (gene/pseudogene).
      
 0.570
LOC102362470
Kruppel-like factor 17.
      
 0.499
PJVK
Pejvakin.
      
 0.470
NWD1
NACHT and WD repeat domain containing 1.
      
 0.465
H2ZTH5_LATCH
Hydroxysteroid (17-beta) dehydrogenase 14.
      
 0.440
CASQ1
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
      
 0.434
VLDLR
Very low density lipoprotein receptor.
      
 0.431
INTS11
Integrator complex subunit 11.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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