STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGAP6Transmembrane protein 8A. (780 aa)    
Predicted Functional Partners:
NPRL3
NPR3 like, GATOR1 complex subunit.
      
 0.778
LUC7L
LUC7 like.
      
 0.727
HBZ
Hemoglobin subunit zeta; Belongs to the globin family.
      
 0.608
HMGXB4
HMG-box containing 4.
      
 0.546
CFDP1
Craniofacial development protein 1; May play a role during embryogenesis.
      
 0.522
SAMD5
Sterile alpha motif domain containing 5.
      
 0.472
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
      
 0.471
FOXRED2
FAD dependent oxidoreductase domain containing 2.
      
 0.440
METTL23
Methyltransferase like 23.
      
 0.435
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
      
 0.434
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.