STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIDAReactive intermediate imine deaminase A homolog. (137 aa)    
Predicted Functional Partners:
HACL1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
    
 0.892
ILVBL
IlvB acetolactate synthase like; Belongs to the TPP enzyme family.
    
 0.892
CNOT9
CCR4-NOT transcription complex subunit 9.
    
 
 0.857
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 
 0.850
H3B0I4_LATCH
Si:ch73-263o4.3.
 
 0.794
CNOT1
CCR4-NOT transcription complex subunit 1.
    
 
 0.790
SDSL
Serine dehydratase like.
  
 0.779
EXOSC7
Exosome component 7.
    
   0.765
UGCG
UDP-glucose ceramide glucosyltransferase.
  
 0.743
SRR
Serine racemase.
  
 0.743
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.