STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR47WD repeat domain 47. (925 aa)    
Predicted Functional Partners:
WDR78
WD repeat domain 78.
      
 0.825
WDR63
WD repeat domain 63.
      
 0.717
WDR45
WD repeat domain 45.
      
 0.712
CAMSAP2
Calmodulin regulated spectrin associated protein family member 2.
 
 
 
 0.647
FBXO33
F-box protein 33.
      
 0.604
IFT140
Intraflagellar transport 140.
      
 0.585
CAMSAP3
Calmodulin regulated spectrin associated protein family member 3.
 
 
 
 0.583
STRN
Striatin.
   
  
 0.575
WDR37
WD repeat domain 37.
      
0.560
CAMSAP1
Calmodulin regulated spectrin associated protein 1.
 
 
 
 0.523
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.