STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNX1Motor neuron and pancreas homeobox 1. (313 aa)    
Predicted Functional Partners:
RFX4
Regulatory factor X4.
      
 0.637
TBX20
T-box transcription factor 20.
    
 
 0.630
RFX6
Regulatory factor X6.
      
 0.575
LHX3
LIM homeobox 3.
   
 
 0.558
ISL2
ISL LIM homeobox 2.
    
 
 0.549
VIPR1
Vasoactive intestinal peptide receptor 1; Belongs to the G-protein coupled receptor 2 family.
      
 0.528
NKD2
NKD inhibitor of WNT signaling pathway 2.
      
 0.502
CRYAA
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
      
 0.471
WT1
WT1 transcription factor.
    
 0.467
GLIS3
GLIS family zinc finger 3.
    
 0.460
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.