STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3AWT9_LATCHUncharacterized protein; Belongs to the cyclin family. (271 aa)    
Predicted Functional Partners:
LOC102365114
Uncharacterized protein.
   
 0.809
FZR1
Fizzy and cell division cycle 20 related 1.
   
 0.809
CDC20
Cell division cycle 20.
   
 0.809
CDC20B
Cell division cycle 20B.
   
 0.809
CDK1
Cyclin dependent kinase 1; Belongs to the protein kinase superfamily.
   
 0.807
INTU
Inturned planar cell polarity protein.
   
 0.800
LOC102367189
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.792
CDK2
Cyclin dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.792
CDC27
Cell division cycle 27.
   
 0.789
ANAPC10
Anaphase promoting complex subunit 10.
   
 0.777
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.