STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPNMBGlycoprotein nmb. (607 aa)    
Predicted Functional Partners:
TFEC
Transcription factor EC.
      
 0.602
ANXA5
Annexin.
      
 0.560
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
   
  
 0.554
ERBB4
Protein kinase domain-containing protein.
    
 0.497
ERBB3
Protein kinase domain-containing protein.
    
 0.497
ERBB4-2
Protein kinase domain-containing protein.
    
 0.497
H3A7N7_LATCH
GF_recep_IV domain-containing protein.
    
 0.497
ERBB2
Receptor protein-tyrosine kinase.
    
 0.497
SRMS
Tyrosine-protein kinase.
   
 0.477
FYN
Tyrosine-protein kinase.
   
 0.477
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.