STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXNDC9Thioredoxin domain containing 9. (225 aa)    
Predicted Functional Partners:
MRPL30
Mitochondrial ribosomal protein L30.
   
  
 0.809
MSRA
Methionine sulfoxide reductase A.
   
 0.613
H3A9U3_LATCH
PMSR domain-containing protein.
   
 0.613
LOC102345227
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
      
 0.613
PRDX5
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.598
MRPS17
Mitochondrial ribosomal protein S17.
   
    0.567
PDCL3
Phosducin like 3.
    
 
0.566
PDCL2
Phosducin like 2.
    
 
0.566
SCNM1
Sodium channel modifier 1.
    
 
 0.560
HTT
Huntingtin.
    
 0.558
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.