STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3AXH2_LATCHUncharacterized protein. (210 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.700
TNNT1
Troponin T1, slow skeletal type.
   
 0.527
TNNT3
Troponin T3, fast skeletal type.
   
 0.527
TNNT2
Troponin T2, cardiac type.
   
 0.527
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.523
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.519
MYL5
Myosin light chain 5.
   
 0.515
MYL2
Myosin light chain 2.
   
 0.515
H3BF30_LATCH
Uncharacterized protein.
   
 0.515
LOC102346545
Myosin, light chain 12, genome duplicate 2.
   
 0.512
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.