STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRBP1Ribosome binding protein 1. (1345 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.829
TNIP1
TNFAIP3 interacting protein 1.
    
 
 0.636
SYNJ2BP
PDZ domain-containing protein.
    
 0.624
LOC102345465
Uncharacterized protein.
    
 0.612
H3AN32_LATCH
Uncharacterized protein.
    
 0.612
SPPL2A
Signal peptide peptidase like 2A.
    
 0.598
LOC102348288
Uncharacterized protein.
    
 
 0.595
MXD1
MAX dimerization protein 1.
    
 
 0.594
MARK3
Non-specific serine/threonine protein kinase.
     
 0.593
MXD4
MAX dimerization protein 4.
    
 
 0.592
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.