STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPIGPeptidylprolyl isomerase G. (677 aa)    
Predicted Functional Partners:
PTGES3
Prostaglandin E synthase 3.
   
 0.923
AHSA1
Activator of HSP90 ATPase activity 1.
   
 
 0.909
SLU7
SLU7 homolog, splicing factor.
   
 0.890
CDC40
Cell division cycle 40.
   
 0.870
PTGES3L
Alanyl-tRNA synthetase domain containing 1.
   
 0.867
DHX38
DEAH-box helicase 38.
   
 0.864
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.863
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
  
0.853
CWC25
CWC25 spliceosome associated protein homolog.
   
 0.849
SYF2
SYF2 pre-mRNA splicing factor.
   
 0.844
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.